Although the film never explicitly states it, it's pretty clear that Agent Smecker is gay. The fact that he is intimate with another man in the film is pretty clear evidence. He also attends a gay bar for his drinking binge. However, this doesn't stop him from being rather belligerent towards other gay men and calling them 'fag' or 'fairy'.
To put it simply the Unrated version features several extended action sequences and bloody shootouts that are missing in the R-rated version of the movie. You can find a detailed comparison between both versions with pictures here.
On Murphy's hand it says "Veritas" (Truth), and on Connor's hand it says "Aequitas" (Justice).
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