Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway.
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- 1. MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK.(27 authors)
- Willett BJ 1
- Grove J 1
- MacLean OA 1
- De Lorenzo G 1
- Furnon W 1
- Cantoni D 1
- Scott S 1
- Logan N 1
- Ashraf S 1
- Manali M 1
- Szemiel A 1
- Cowton V 1
- Vink E 1
- Harvey WT 1
- Davis C 1
- Asamaphan P 1
- Smollett K 1
- Tong L 1
- Orton R 1
- Hughes J 1
- da Silva Filipe A 1
- Pinto RM 1
- Murcia PR 1
- Patel AH 1
- Robertson DL 1
- Palmarini M 1
- Thomson EC 1, 3
Authors
- 2. School of Mathematics & Statistics, University of Glasgow, Glasgow, UK.(2 authors)
- Wilkie C 2
- Ray S 2
Authors
- 3. NHS Greater Glasgow & Clyde, Glasgow, UK.(6 authors)
- Holland P 3
- Silva V 3
- Puxty K 3
- Gunson R 3
- Haughney J 3
- Thomson EC 1, 3
Authors
- 4. MRC Biostatistics Unit, University of Cambridge, Cambridge, UK.(1 author)
- Pascall DJ 4
Authors
- 5. Public Health Scotland, Glasgow, UK.(3 authors)
- Yebra G 5
- Shaaban S 5
- Holden MTG 5
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ORCIDs linked to this article
- Young G | 0000-0001-5342-1421
- Grove J | 0000-0001-5390-7579
- Dunachie S | 0000-0001-5665-6293
- Robertson DL | 0000-0001-6338-0221
- de Angelis D | 0000-0001-6619-6112
Nature Microbiology,
01 Oct 2022, 7(10):1709
https://doi.org/10.1038/s41564-022-01241-6 PMID: 36114232 PMCID: PMC9483304
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Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
![corresponding author](/http/europepmc.org/corehtml/pmc/pmcgifs/corrauth.gif)
![corresponding author](/http/europepmc.org/corehtml/pmc/pmcgifs/corrauth.gif)
![corresponding author](/http/europepmc.org/corehtml/pmc/pmcgifs/corrauth.gif)
Brian J. Willett
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Joe Grove
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Oscar A. MacLean
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Craig Wilkie
2School of Mathematics & Statistics, University of Glasgow, Glasgow, UK
Giuditta De Lorenzo
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Wilhelm Furnon
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Diego Cantoni
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Sam Scott
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Nicola Logan
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Shirin Ashraf
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Maria Manali
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Agnieszka Szemiel
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Vanessa Cowton
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Elen Vink
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
William T. Harvey
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Chris Davis
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Patawee Asamaphan
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Katherine Smollett
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Lily Tong
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Richard Orton
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Joseph Hughes
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
David J. Pascall
4MRC Biostatistics Unit, University of Cambridge, Cambridge, UK
Ana da Silva Filipe
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Matthew T. G. Holden
5Public Health Scotland, Glasgow, UK
6School of Medicine, University of St Andrews, St Andrews, UK
Rute Maria Pinto
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Pablo R. Murcia
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Arvind H. Patel
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
David L. Robertson
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Massimo Palmarini
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
Surajit Ray
2School of Mathematics & Statistics, University of Glasgow, Glasgow, UK
Emma C. Thomson
1MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK
3NHS Greater Glasgow & Clyde, Glasgow, UK
9London School of Hygiene and Tropical Medicine, London, UK
![corresponding author](/http/europepmc.org/corehtml/pmc/pmcgifs/corrauth.gif)
Correction to: Nature Microbiology 10.1038/s41564-022-01143-7, published online 7 July 2022.
In the version of this article initially published, the author affiliation information was incomplete, neglecting to note that Brian J. Willett, Joe Grove, Oscar A. MacLean, Craig Wilkie, Giuditta De Lorenzo, Wilhelm Furnon, Diego Cantoni, Sam Scott, Nicola Logan and Shirin Ashraf contributed equally and that John Haughney, David L. Robertson, Massimo Palmarini, Surajit Ray and Emma C. Thomson jointly supervised the work, as now indicated in the HTML and PDF versions of the article.
Contributor Information
Brian J. Willett, Email: [email protected].
Joe Grove, Email: [email protected].
Emma C. Thomson, Email: [email protected].
PITCH Consortium:
Susanna Dunachie
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
11Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK
12Oxford Centre For Global Health Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
13Mahidol-Oxford Tropical Medicine Research Unit, Bangkok, Thailand
Paul Klenerman
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
11Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK
14Translational Gastroenterology Unit, University of Oxford, Oxford, UK
15NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, UK
Eleanor Barnes
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
11Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK
14Translational Gastroenterology Unit, University of Oxford, Oxford, UK
15NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, UK
Anthony Brown
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Sandra Adele
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
12Oxford Centre For Global Health Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Barbara Kronsteiner
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
12Oxford Centre For Global Health Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Sam M. Murray
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Priyanka Abraham
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Alexandra Deeks
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
M. Azim Ansari
10Peter Medawar Building for Pathogen Research, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK
Thushan de Silva
16Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Sheffield, UK
17Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
Lance Turtle
18NIHR Health Protection Research Unit in Emerging and Zoonotic Infections, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
19Tropical and Infectious Disease Unit, Liverpool University Hospitals NHS Foundation Trust, Liverpool Health Partners, Liverpool, UK
Shona Moore
18NIHR Health Protection Research Unit in Emerging and Zoonotic Infections, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
James Austin
18NIHR Health Protection Research Unit in Emerging and Zoonotic Infections, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
Alex Richter
20Institute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Birmingham, UK
21University Hospitals Birmingham NHS Foundation Trust, Birmingham, UK
Christopher Duncan
22Translational and Clinical Research Institute Immunity and Inflammation Theme, Newcastle University, Newcastle, UK
23Department of Infection and Tropical Medicine, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle, UK
Rebecca Payne
22Translational and Clinical Research Institute Immunity and Inflammation Theme, Newcastle University, Newcastle, UK
The COVID-19 Genomics UK (COG-UK) Consortium:
Amy Ash
24Barking, Havering and Redbridge University Hospitals NHS Trust, Romford, UK
Cherian Koshy
24Barking, Havering and Redbridge University Hospitals NHS Trust, Romford, UK
Derek J. Fairley
26Belfast Health and Social Care Trust, Belfast, UK
James P. McKenna
26Belfast Health and Social Care Trust, Belfast, UK
Christophe Fraser
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
David Bonsall
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Helen Fryer
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Katrina Lythgoe
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Laura Thomson
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Tanya Golubchik
28Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Abigail Murray
29Blackpool Teaching Hospitals NHS Foundation Trust, Blackpool, UK
Dawn Singleton
29Blackpool Teaching Hospitals NHS Foundation Trust, Blackpool, UK
Shaun M. Beckwith
29Blackpool Teaching Hospitals NHS Foundation Trust, Blackpool, UK
Nicola Reynolds
31Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK
Ben Warne
32Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK
Joshua Maksimovic
33Cardiff and Vale University Health Board, Cardiff, UK
Karla Spellman
33Cardiff and Vale University Health Board, Cardiff, UK
Kathryn McCluggage
33Cardiff and Vale University Health Board, Cardiff, UK
Amita Patel
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Bindi Patel
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Gaia Nebbia
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Jonathan Edgeworth
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Luke B. Snell
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Rahul Batra
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Themoula Charalampous
35Centre for Clinical Infection and Diagnostics Research, Department of Infectious Diseases, Guy’s and St Thomas’ NHS Foundation Trust, London, UK
Angela H. Beckett
36Centre for Enzyme Innovation, University of Portsmouth, Portsmouth, UK
Ekaterina Shelest
36Centre for Enzyme Innovation, University of Portsmouth, Portsmouth, UK
Samuel C. Robson
36Centre for Enzyme Innovation, University of Portsmouth, Portsmouth, UK
Anthony P. Underwood
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
Ben E. W. Taylor
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
Corin A. Yeats
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
David M. Aanensen
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
Khalil Abudahab
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
Mirko Menegazzo
37Centre for Genomic Pathogen Surveillance, University of Oxford, Oxford, UK
Amelia Joseph
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Gemma Clark
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Hannah C. Howson-Wells
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Louise Berry
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Manjinder Khakh
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Michelle M. Lister
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Tim Boswell
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Vicki M. Fleming
38Clinical Microbiology Department, Queens Medical Centre, Nottingham University Hospitals NHS Trust, Nottingham, UK
Christopher W. Holmes
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Claire L. McMurray
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Jessica Shaw
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Julian W. Tang
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Karlie Fallon
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Mina Odedra
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Nicholas J. Willford
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Paul W. Bird
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Thomas Helmer
39Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
Lesley-Anne Williams
40County Durham and Darlington NHS Foundation Trust, Darlington, UK
Nicola Sheriff
40County Durham and Darlington NHS Foundation Trust, Darlington, UK
Sharon Campbell
40County Durham and Darlington NHS Foundation Trust, Darlington, UK
Veena Raviprakash
40County Durham and Darlington NHS Foundation Trust, Darlington, UK
Victoria Blakey
40County Durham and Darlington NHS Foundation Trust, Darlington, UK
Christopher Moore
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Fei Sang
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Johnny Debebe
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Matthew Carlile
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Matthew W. Loose
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Nadine Holmes
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Victoria Wright
41Deep Seq, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
M. Estee Torok
42Department of Infectious Diseases and Microbiology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK
William L. Hamilton
42Department of Infectious Diseases and Microbiology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK
Alessandro M. Carabelli
43Department of Medicine, University of Cambridge, Cambridge, UK
Andrew Jermy
43Department of Medicine, University of Cambridge, Cambridge, UK
Beth Blane
43Department of Medicine, University of Cambridge, Cambridge, UK
Carol M. Churcher
43Department of Medicine, University of Cambridge, Cambridge, UK
Catherine Ludden
43Department of Medicine, University of Cambridge, Cambridge, UK
Dinesh Aggarwal
43Department of Medicine, University of Cambridge, Cambridge, UK
Elaine Westwick
43Department of Medicine, University of Cambridge, Cambridge, UK
Ellena Brooks
43Department of Medicine, University of Cambridge, Cambridge, UK
Georgina M. McManus
43Department of Medicine, University of Cambridge, Cambridge, UK
Katerina Galai
43Department of Medicine, University of Cambridge, Cambridge, UK
Ken Smith
43Department of Medicine, University of Cambridge, Cambridge, UK
Kim S. Smith
43Department of Medicine, University of Cambridge, Cambridge, UK
MacGregor Cox
43Department of Medicine, University of Cambridge, Cambridge, UK
Mireille Fragakis
43Department of Medicine, University of Cambridge, Cambridge, UK
Patrick Maxwell
43Department of Medicine, University of Cambridge, Cambridge, UK
Sarah Judges
43Department of Medicine, University of Cambridge, Cambridge, UK
Sharon J. Peacock
43Department of Medicine, University of Cambridge, Cambridge, UK
Theresa Feltwell
43Department of Medicine, University of Cambridge, Cambridge, UK
Anita Kenyon
44Department of Microbiology, Kettering General Hospital, Kettering, UK
Sahar Eldirdiri
44Department of Microbiology, Kettering General Hospital, Kettering, UK
Thomas Davis
44Department of Microbiology, Kettering General Hospital, Kettering, UK
Joshua F. Taylor
45Department of Microbiology, South West London Pathology, London, UK
Ngee Keong Tan
45Department of Microbiology, South West London Pathology, London, UK
Alex E. Zarebski
46Department of Zoology, University of Oxford, Oxford, UK
Bernardo Gutierrez
46Department of Zoology, University of Oxford, Oxford, UK
Jayna Raghwani
46Department of Zoology, University of Oxford, Oxford, UK
Louis du Plessis
46Department of Zoology, University of Oxford, Oxford, UK
Moritz U. G. Kraemer
46Department of Zoology, University of Oxford, Oxford, UK
Oliver G. Pybus
46Department of Zoology, University of Oxford, Oxford, UK
Sarah Francois
46Department of Zoology, University of Oxford, Oxford, UK
Stephen W. Attwood
46Department of Zoology, University of Oxford, Oxford, UK
Tetyana I. Vasylyeva
46Department of Zoology, University of Oxford, Oxford, UK
Aminu S. Jahun
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Ian G. Goodfellow
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Iliana Georgana
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Malte L. Pinckert
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Myra Hosmillo
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Rhys Izuagbe
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Yasmin Chaudhry
47Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK
Felicity Ryan
48East Kent Hospitals University NHS Foundation Trust, Canterbury, UK
Hannah Lowe
48East Kent Hospitals University NHS Foundation Trust, Canterbury, UK
Samuel Moses
48East Kent Hospitals University NHS Foundation Trust, Canterbury, UK
Luke Bedford
49East Suffolk and North Essex NHS Foundation Trust, Colchester, UK
James S. Cargill
50East Sussex Healthcare NHS Trust, St. Leonards-on-Sea, UK
Warwick Hughes
50East Sussex Healthcare NHS Trust, St. Leonards-on-Sea, UK
Jonathan Moore
51Gateshead Health NHS Foundation Trust, Gateshead, UK
Susanne Stonehouse
51Gateshead Health NHS Foundation Trust, Gateshead, UK
Divya Shah
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Jack C. D. Lee
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Julianne R. Brown
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Kathryn A. Harris
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Laura Atkinson
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Nathaniel Storey
52Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK
Moira J. Spyer
53Great Ormond Street Institute of Child Health (GOS ICH), University College London (UCL), London, UK
Flavia Flaviani
54Guy’s and St. Thomas’ Biomedical Research Centre, London, UK
Adela Alcolea-Medina
55Guy’s and St. Thomas’ NHS Foundation Trust, London, UK
Jasveen Sehmi
55Guy’s and St. Thomas’ NHS Foundation Trust, London, UK
Natasha Ohemeng-Kumi
55Guy’s and St. Thomas’ NHS Foundation Trust, London, UK
Perminder Smith
55Guy’s and St. Thomas’ NHS Foundation Trust, London, UK
Beatrice Bertolusso
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Claire Thomas
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Gabrielle Vernet
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Jessica Lynch
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Nathan Moore
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Nicholas Cortes
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Rebecca Williams
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Stephen P. Kidd
56Hampshire Hospitals NHS Foundation Trust, Basingstoke, UK
Darren L. Smith
59Hub for Biotechnology in the Built Environment, Northumbria University, Newcastle upon Tyne, UK
Gregory R. Young
59Hub for Biotechnology in the Built Environment, Northumbria University, Newcastle upon Tyne, UK
Matthew Bashton
59Hub for Biotechnology in the Built Environment, Northumbria University, Newcastle upon Tyne, UK
Katie Kitchman
60Hull University Teaching Hospitals NHS Trust, Hull, UK
Kavitha Gajee
60Hull University Teaching Hospitals NHS Trust, Hull, UK
Kirstine Eastick
60Hull University Teaching Hospitals NHS Trust, Hull, UK
Patrick J. Lillie
60Hull University Teaching Hospitals NHS Trust, Hull, UK
Phillipa J. Burns
60Hull University Teaching Hospitals NHS Trust, Hull, UK
William Everson
60Hull University Teaching Hospitals NHS Trust, Hull, UK
Alison H. Holmes
61Imperial College Healthcare NHS Trust, London, UK
Pinglawathee Madona
61Imperial College Healthcare NHS Trust, London, UK
Siddharth Mookerjee
61Imperial College Healthcare NHS Trust, London, UK
Cassie F. Pope
63Infection Care Group, St George’s University Hospitals NHS Foundation Trust, London, UK
Adam A. Witney
64Institute for Infection and Immunity, St George’s University of London, London, UK
Irene M. Monahan
64Institute for Infection and Immunity, St George’s University of London, London, UK
Kenneth G. Laing
64Institute for Infection and Immunity, St George’s University of London, London, UK
Katherine L. Smollett
65Institute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK
Alan McNally
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Claire McMurray
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Joanne Stockton
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Joshua Quick
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Nicholas J. Loman
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Radoslaw Poplawski
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Sam Nicholls
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Will Rowe
66Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK
Kate El Bouzidi
68King’s College Hospital NHS Foundation Trust, London, UK
Malur Sudhanva
68King’s College Hospital NHS Foundation Trust, London, UK
Temi Lampejo
68King’s College Hospital NHS Foundation Trust, London, UK
Graciela Sluga
71Maidstone and Tunbridge Wells NHS Trust, Maidstone, UK
Karen T. Withell
71Maidstone and Tunbridge Wells NHS Trust, Maidstone, UK
Nicholas W. Machin
72Manchester University NHS Foundation Trust, Manchester, UK
Ryan P. George
72Manchester University NHS Foundation Trust, Manchester, UK
Shazaad S. Y. Ahmad
72Manchester University NHS Foundation Trust, Manchester, UK
David T. Pritchard
73Microbiology Department, Buckinghamshire Healthcare NHS Trust, Aylesbury, UK
Debbie Binns
73Microbiology Department, Buckinghamshire Healthcare NHS Trust, Aylesbury, UK
Nick Wong
73Microbiology Department, Buckinghamshire Healthcare NHS Trust, Aylesbury, UK
Victoria James
74Microbiology Department, Buckinghamshire Healthcare NHS Trust, Aylesbury, UK
Chris J. Illingworth
76MRC Biostatistics Unit, University of Cambridge, Cambridge, UK
Chris Jackson
76MRC Biostatistics Unit, University of Cambridge, Cambridge, UK
Daniela de Angelis
76MRC Biostatistics Unit, University of Cambridge, Cambridge, UK
David Pascall
76MRC Biostatistics Unit, University of Cambridge, Cambridge, UK
Afrida Mukaddas
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Alice Broos
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Ana da Silva Filipe
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Daniel Mair
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
David L. Robertson
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Derek W. Wright
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Emma C. Thomson
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Igor Starinskij
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Ioulia Tsatsani
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
James G. Shepherd
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Jenna Nichols
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Joseph Hughes
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Kyriaki Nomikou
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Lily Tong
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Richard J. Orton
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Sreenu Vattipally
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
William T. Harvey
77MRC-University of Glasgow Centre for Virus Research, Glasgow, UK
Lindsay Coupland
81Norfolk and Norwich University Hospitals NHS Foundation Trust, Norwich, UK
Rachael Stanley
81Norfolk and Norwich University Hospitals NHS Foundation Trust, Norwich, UK
Samir Dervisevic
81Norfolk and Norwich University Hospitals NHS Foundation Trust, Norwich, UK
Clive Graham
83North Cumbria Integrated Care NHS Foundation Trust, Carlisle, UK
Debra Padgett
83North Cumbria Integrated Care NHS Foundation Trust, Carlisle, UK
Edward Barton
83North Cumbria Integrated Care NHS Foundation Trust, Carlisle, UK
Garren Scott
83North Cumbria Integrated Care NHS Foundation Trust, Carlisle, UK
Mariyam Mirfenderesky
84North Middlesex University Hospital NHS Trust, London, UK
Emma Swindells
85North Tees and Hartlepool NHS Foundation Trust, Stockton on Tees, UK
Jane Greenaway
85North Tees and Hartlepool NHS Foundation Trust, Stockton on Tees, UK
Rebecca Denton-Smith
85North Tees and Hartlepool NHS Foundation Trust, Stockton on Tees, UK
Robyn Turnbull
85North Tees and Hartlepool NHS Foundation Trust, Stockton on Tees, UK
Giles Idle
86Northumbria Healthcare NHS Foundation Trust, Newcastle upon Tyne, UK
Kevin Cole
86Northumbria Healthcare NHS Foundation Trust, Newcastle upon Tyne, UK
John H. Henderson
87Northumbria University, Newcastle upon Tyne, UK
Nichola Duckworth
88Path Links, Northern Lincolnshire and Goole NHS Foundation Trust, Grimsby, UK
Phillip Clarke
88Path Links, Northern Lincolnshire and Goole NHS Foundation Trust, Grimsby, UK
Sarah Walsh
88Path Links, Northern Lincolnshire and Goole NHS Foundation Trust, Grimsby, UK
Tim J. Sloan
88Path Links, Northern Lincolnshire and Goole NHS Foundation Trust, Grimsby, UK
Kelly Bicknell
89Portsmouth Hospitals University NHS Trust, Portsmouth, UK
Robert Impey
89Portsmouth Hospitals University NHS Trust, Portsmouth, UK
Sarah Wyllie
89Portsmouth Hospitals University NHS Trust, Portsmouth, UK
Scott Elliott
89Portsmouth Hospitals University NHS Trust, Portsmouth, UK
Sharon Glaysher
89Portsmouth Hospitals University NHS Trust, Portsmouth, UK
Declan T. Bradley
90Public Health Agency, Northern Ireland, Belfast, UK
Nicholas F. Killough
90Public Health Agency, Northern Ireland, Belfast, UK
Katherine A. Twohig
93Public Health England, Colindale, London, UK
Sara Kumziene-Summerhayes
95Public Health Wales, Cardiff, UK
Alexander J. Trotter
96Quadram Institute Bioscience, Norwich, UK
Ebenezer Foster-Nyarko
96Quadram Institute Bioscience, Norwich, UK
Leonardo de Oliveira Martins
96Quadram Institute Bioscience, Norwich, UK
Nabil-Fareed Alikhan
96Quadram Institute Bioscience, Norwich, UK
Newara A. Ramadan
99Royal Brompton and Harefield Hospitals, London, UK
Bridget A. Knight
100Royal Devon and Exeter NHS Foundation Trust, Exeter, UK
Christopher R. Jones
100Royal Devon and Exeter NHS Foundation Trust, Exeter, UK
Cressida Auckland
100Royal Devon and Exeter NHS Foundation Trust, Exeter, UK
Helen Morcrette
100Royal Devon and Exeter NHS Foundation Trust, Exeter, UK
Jennifer Poyner
100Royal Devon and Exeter NHS Foundation Trust, Exeter, UK
Dianne Irish-Tavares
101Royal Free London NHS Foundation Trust, London, UK
Tabitha W. Mahungu
101Royal Free London NHS Foundation Trust, London, UK
Yann Bourgeois
102School of Biological Sciences, University of Portsmouth, Portsmouth, UK
Christopher Fearn
103School of Pharmacy & Biomedical Sciences, University of Portsmouth, Portsmouth, UK
Kate F. Cook
103School of Pharmacy & Biomedical Sciences, University of Portsmouth, Portsmouth, UK
Katie F. Loveson
103School of Pharmacy & Biomedical Sciences, University of Portsmouth, Portsmouth, UK
Salman Goudarzi
103School of Pharmacy & Biomedical Sciences, University of Portsmouth, Portsmouth, UK
Cariad Evans
104Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
David G. Partridge
104Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
Kate Johnson
104Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
Mehmet Yavus
104Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
Mohammad Raza
104Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK
Craig Mower
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Paul Baker
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Sarah Essex
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Stephen Bonner
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Leanne J. Murray
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Louisa K. Watson
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Steven Liggett
105South Tees Hospitals NHS Foundation Trust, Middlesbrough, UK
Brendan A. I. Payne
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Gary Eltringham
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Jennifer Collins
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Sheila Waugh
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Shirelle Burton-Fanning
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Yusri Taha
108The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK
Christopher Jeanes
109The Queen Elizabeth Hospital King’s Lynn NHS Foundation Trust, King’s Lynn, UK
Andrea N. Gomes
110The Royal Marsden NHS Foundation Trust, London, UK
Darren R. Murray
110The Royal Marsden NHS Foundation Trust, London, UK
Paula Ashfield
111The Royal Wolverhampton NHS Trust, Wolverhampton, UK
Angus Best
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Benita Percival
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Emma Moles-Garcia
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Fiona Ashford
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Jeremy Mirza
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Liam Crawford
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Megan Mayhew
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Nicola Cumley
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Oliver Megram
112Turnkey Laboratory, University of Birmingham, Birmingham, UK
Dan Frampton
113University College London Division of Infection and Immunity, London, UK
Judith Heaney
114University College London Hospital Advanced Pathogen Diagnostics Unit, London, UK
Matthew Byott
114University College London Hospital Advanced Pathogen Diagnostics Unit, London, UK
Catherine Houlihan
115University College London Hospitals NHS Foundation Trust, London, UK
Charlotte A. Williams
115University College London Hospitals NHS Foundation Trust, London, UK
Eleni Nastouli
115University College London Hospitals NHS Foundation Trust, London, UK
Helen L. Lowe
115University College London Hospitals NHS Foundation Trust, London, UK
John A. Hartley
115University College London Hospitals NHS Foundation Trust, London, UK
Judith Breuer
115University College London Hospitals NHS Foundation Trust, London, UK
Laurentiu Maftei
115University College London Hospitals NHS Foundation Trust, London, UK
Leah Ensell
115University College London Hospitals NHS Foundation Trust, London, UK
Marius Cotic
115University College London Hospitals NHS Foundation Trust, London, UK
Matteo Mondani
115University College London Hospitals NHS Foundation Trust, London, UK
Megan Driscoll
115University College London Hospitals NHS Foundation Trust, London, UK
Nadua Bayzid
115University College London Hospitals NHS Foundation Trust, London, UK
Rachel J. Williams
115University College London Hospitals NHS Foundation Trust, London, UK
Sunando Roy
115University College London Hospitals NHS Foundation Trust, London, UK
Adhyana I. K. Mahanama
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Buddhini Samaraweera
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Eleri Wilson-Davies
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Emanuela Pelosi
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Helen Umpleby
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Helen Wheeler
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Jacqui A. Prieto
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Kordo Saeed
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Matthew Harvey
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Sarah Jeremiah
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Siona Silviera
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Stephen Aplin
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Thea Sass
116University Hospital Southampton NHS Foundation Trust, Southampton, UK
Ben Macklin
117University Hospitals Dorset NHS Foundation Trust, Poole, UK
Dorian Crudgington
117University Hospitals Dorset NHS Foundation Trust, Poole, UK
Liz A. Sheridan
117University Hospitals Dorset NHS Foundation Trust, Poole, UK
Benjamin J. Cogger
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Cassandra S. Malone
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Florence Munemo
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Hannah Huckson
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Jonathan Lewis
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Lisa J. Easton
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Manasa Mutingwende
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Michelle J. Erkiert
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Mohammed O. Hassan-Ibrahim
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Nicola J. Chaloner
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Olga Podplomyk
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Paul Randell
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Roberto Nicodemi
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Sarah Lowdon
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Thomas Somassa
118University Hospitals Sussex NHS Foundation Trust, Worthing, UK
Kathleen A. Williamson
123University of Edinburgh, Edinburgh, UK
Miren Iturriza-Gomara
125University of Liverpool, Liverpool, UK
Emily J. Park
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Jack D. Hill
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Jayasree Dey
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Jonathan Ball
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Joseph G. Chappell
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Patrick C. McClure
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Timothy Byaruhanga
128Virology, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, UK
Amy Trebes
130Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Angie Green
130Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK
David Buck
130Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK
George MacIntyre-Cockett
130Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK
John A. Todd
130Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Jaime M. Tovar-Corona
131Wellcome Sanger Institute, Hinxton, UK
Michael H. Spencer Chapman
131Wellcome Sanger Institute, Hinxton, UK
Alasdair Maclean
132West of Scotland Specialist Virology Centre, NHS Greater Glasgow and Clyde, Glasgow, UK
Emily J. Goldstein
132West of Scotland Specialist Virology Centre, NHS Greater Glasgow and Clyde, Glasgow, UK
Lynne Ferguson
132West of Scotland Specialist Virology Centre, NHS Greater Glasgow and Clyde, Glasgow, UK
Rachael Tomb
132West of Scotland Specialist Virology Centre, NHS Greater Glasgow and Clyde, Glasgow, UK
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Funding
Funders who supported this work.
Academy of Medical Sciences (1)
Grant ID: AMS-CSF4-Torok
Biotechnology and Biological Sciences Research Council (2)
Grant ID: BB/R004250/1
Grant ID: BB/R019843/1
Medical Research Council (6)
Investigation of proven vaccine breakthrough by SARS-CoV-2 variants in established UK healthcare worker cohorts: SIREN consortium & PITCH Plus Pathway
Professor Susan Hopkins, Public Health England
Grant ID: MR/W02067X/1
Grant ID: HDRUK2021.0155
COVID-19 Modelling Consortium: quantitative epidemiological predictions in response to an evolving pandemic
Professor Matthew Keeling, University of Warwick
Grant ID: MR/V038613/1
Viral Genomics and Bioinformatics
Professor Andrew Davison, University of Glasgow
Grant ID: MC_UU_12014/12
Using a comparative One Health approach to investigate the structural basis of antigenic variation among human and avian influenza viruses
Dr William Harvey, University of Glasgow
Grant ID: MR/R024758/1
G2P-UK; A National Virology Consortium to address phenotypic consequences of SARSCoV-2 genomic variation
Professor Wendy Barclay, Imperial College London
Grant ID: MR/W005611/1
National Institute for Health Research (NIHR) (2)
Grant ID: ACF-2018-04-014
Grant ID: NF-SI-0617-10139
Wellcome Trust (2)
Innate lymphoid cells; promoting homeostasis and preventing gut dysbiosis
Dr Rebecca Payne, Newcastle University
Grant ID: 204721/Z/16/Z
Microglia and type I interferon: protective and pathogenic mechanisms
Dr Christopher Duncan, Newcastle University
Grant ID: 211153/Z/18/Z