Vadiraja Bhat, PhD.

Vadiraja Bhat, PhD.

Bengaluru, Karnataka, India
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  • Shank3 mutation in a mouse model of autism leads to changes in the S-nitroso-proteome and affects key proteins involved in vesicle release and synaptic function

    Molecular Psychiatry, Nature

    Mutation in the SHANK3 human gene leads to different neuropsychiatric diseases including Autism Spectrum Disorder (ASD), intellectual disabilities and Phelan-McDermid syndrome. Shank3 disruption in mice leads to dysfunction of synaptic transmission, behavior, and development. Protein S-nitrosylation, the nitric oxide (NO•)-mediated posttranslational modification (PTM) of cysteine thiols (SNO), modulates the activity of proteins that regulate key signaling pathways. We tested the hypothesis that…

    Mutation in the SHANK3 human gene leads to different neuropsychiatric diseases including Autism Spectrum Disorder (ASD), intellectual disabilities and Phelan-McDermid syndrome. Shank3 disruption in mice leads to dysfunction of synaptic transmission, behavior, and development. Protein S-nitrosylation, the nitric oxide (NO•)-mediated posttranslational modification (PTM) of cysteine thiols (SNO), modulates the activity of proteins that regulate key signaling pathways. We tested the hypothesis that Shank3 mutation would generate downstream effects on PTM of critical proteins that lead to modification of synaptic functions. SNO-proteins in two ASD-related brain regions, cortex and striatum of young and adult InsG3680(+/+) mice (a human mutation-based Shank3 mouse model), were identified by an innovative mass spectrometric method, SNOTRAP. We found changes of the SNO-proteome in the mutant compared to WT in both ages. Pathway analysis showed enrichment of processes affected in ASD. SNO-Calcineurin in mutant led to a significant increase of phosphorylated Synapsin1 and CREB, which affect synaptic vesicle mobilization and gene transcription, respectively. A significant increase of 3-nitrotyrosine was found in the cortical regions of the adult mutant, signaling both oxidative and nitrosative stress. Neuronal NO• Synthase (nNOS) was examined for levels and localization in neurons and no significant difference was found in WT vs. mutant. S-nitrosoglutathione concentrations were higher in mutant mice compared to WT. This is the first study on NO•-related molecular changes and SNO-signaling in the brain of an ASD mouse model that allows the characterization and identification of key proteins, cellular pathways, and neurobiological mechanisms that might be affected in ASD

    Other authors
    • Haitham Amal
    • Boaz Barak
    • Guanyu Gong
    • Brian A. Joughin
    • John S. Wishnok
    • Guoping Feng
    • Steven R. Tannenbaum
    See publication
  • Pigs, Unlike Mice, Have Two Distinct Colonic Stem Cell Populations Similar to Humans That Respond to High-Calorie Diet Prior to Insulin Resistance

    Cancer Prevention Research

    Venkata Charepalli 1, Lavanya Reddivari 2, Sridhar Radhakrishnan 1, Elisabeth Eriksson 3, Xia Xiao 4, Sung Woo Kim 5, Frank Shen 6, Matam Vijay-Kumar 4 7, Qunhua Li 6, Vadiraja B Bhat 8, Rob Knight 9 10, Jairam K P Vanamala 11 12 13

    1Department of Food Science, The Pennsylvania State University, University Park, Pennsylvania.
    2Department of Plant Science, The Pennsylvania State University, University Park, Pennsylvania.
    3Biotechnology, Applied Nutrition and Food Chemistry, Lund…

    Venkata Charepalli 1, Lavanya Reddivari 2, Sridhar Radhakrishnan 1, Elisabeth Eriksson 3, Xia Xiao 4, Sung Woo Kim 5, Frank Shen 6, Matam Vijay-Kumar 4 7, Qunhua Li 6, Vadiraja B Bhat 8, Rob Knight 9 10, Jairam K P Vanamala 11 12 13

    1Department of Food Science, The Pennsylvania State University, University Park, Pennsylvania.
    2Department of Plant Science, The Pennsylvania State University, University Park, Pennsylvania.
    3Biotechnology, Applied Nutrition and Food Chemistry, Lund University, Lund, Sweden.
    4Department of Nutritional Sciences, The Pennsylvania State University, University Park, Pennsylvania.
    5Department of Animal Science, North Carolina State University, Raleigh, North Carolina.
    6Department of Statistics, The Pennsylvania State University, University Park, Pennsylvania.
    7Department of Medicine, The Pennsylvania State University Medical Center, Hershey, Pennsylvania.
    8Agilent Technologies, Wilmington, Delaware.
    9Department of Pediatrics, University of California, San Diego, California.
    10Department of Computer Science and Engineering, University of California, La Jolla, California.
    11Department of Food Science, The Pennsylvania State University, University Park, Pennsylvania. [email protected].
    12The Penn State Hershey Cancer Institute, Hershey, Pennsylvania.
    13Center for Molecular Immunology and Infectious Diseases, The Pennsylvania State University, University Park, Pennsylvania.

    See publication
  • Association of Sp1 and Survivin in Epithelial Ovarian Cancer: Sp1 Inhibitor and Cisplatin, a Novel Combination for Inhibiting Epithelial Ovarian Cancer Cell Proliferation

    Tumor Biology

    Umesh T Sankpal 1, Susan B Ingersoll 2, Sarfraz Ahmad 2, Robert W Holloway 2, Vadiraja B Bhat 3, Jerry W Simecka 4 5, Liz Daniel 6, Ekamber Kariali 7, Jamboor K Vishwanatha 1 8, Riyaz Basha 9 10 11
    Affiliations collapse
    Affiliations
    1Institute for Cancer Research, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA.
    2Department of Gynecologic Oncology, Florida Hospital Cancer Institute, Orlando, FL, 32804, USA.
    3Agilent Technologies, Inc., Wilmington, DE…

    Umesh T Sankpal 1, Susan B Ingersoll 2, Sarfraz Ahmad 2, Robert W Holloway 2, Vadiraja B Bhat 3, Jerry W Simecka 4 5, Liz Daniel 6, Ekamber Kariali 7, Jamboor K Vishwanatha 1 8, Riyaz Basha 9 10 11
    Affiliations collapse
    Affiliations
    1Institute for Cancer Research, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA.
    2Department of Gynecologic Oncology, Florida Hospital Cancer Institute, Orlando, FL, 32804, USA.
    3Agilent Technologies, Inc., Wilmington, DE, 19808, USA.
    4Pre-clinical Services, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA.
    5Pharmaceutical Sciences, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA.
    6MD Anderson Cancer Center Orlando, Orlando, FL, 32806, USA.
    7Department of Biotechnology, Sambalpur University, Jyoti Vihar, Sambalpur, Odisha, 768019, India.
    8Molecular and Medical Genetics, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA.
    9Institute for Cancer Research, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA. [email protected].
    10Pre-clinical Services, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA. [email protected].
    11Molecular and Medical Genetics, University of North Texas Health Science Center, Fort Worth, TX, 76107, USA. [email protected].

    See publication
  • S-nitrosation of proteins relevant to Alzheimer's disease during early stages of neurodegeneration

    Proc Natl Acad Sci U S A.

    S-nitrosation of proteins relevant to Alzheimer's disease during early stages of neurodegeneration.
    Seneviratne U, Nott A, Bhat VB, Ravindra KC, Wishnok JS, Tsai LH, Tannenbaum SR.
    1 Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139;
    2 The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139;
    3 Agilent Technologies, Inc., Wilmington, DE…

    S-nitrosation of proteins relevant to Alzheimer's disease during early stages of neurodegeneration.
    Seneviratne U, Nott A, Bhat VB, Ravindra KC, Wishnok JS, Tsai LH, Tannenbaum SR.
    1 Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139;
    2 The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139;
    3 Agilent Technologies, Inc., Wilmington, DE 19808;
    4 Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139 [email protected].

    Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):4152-7. doi: 10.1073/pnas.1521318113. Epub 2016 Mar 24.

    See publication
  • Quantification of Large Peptides in Human Serum using High Resolution Dual Ion Funnel LC-QTOF

  • Quantitative Peptidomics to Measure Neuropeptide Levels in Animal Models Relevant to Psychiatric Disorders

    Methods Mol Biol: Psychiatric Disorders

    Julia S. Gelman1
    Jonathan Wardman2
    Vadiraja B. Bhat3
    Fabio C. Gozzo4
    Lloyd D. Fricker12

    1.Dominick P. Purpura Department of NeuroscienceAlbert Einstein College of MedicineBronxUSA
    2.Department of Molecular PharmacologyAlbert Einstein College of MedicineBronxUSA
    3.Agilent TechnologiesWilmingtonUSA
    4.Institute of ChemistryUniversity of CampinasCampinasBrazil

    See publication
  • Low Abundance Protein Enrichment for Discovery of Candidate Plasma Protein Biomarkers for Early Detection of Breast Cancer

    J Proteomics

    RongMenga, Michael Gormley, Vadiraja B.Bhat, AnneRosenberg, Andrew A.Quongad
    a
    Department of Cancer Biology, Kimmel Cancer Center, Thomas Jefferson University, United States
    b
    Agilent Technologies, Inc., United States
    c
    Thomas Jefferson University Hospital, United States
    d
    Department of Otolaryngology-Head & Neck Surgery, Thomas Jefferson University, United States

    See publication
  • Metabolites of Purine Nucleoside Phosphorylase (NP) in Serum Have the Potential to Delineate Pancreatic Adenocarcinoma

    PLoS One

    Shaiju K. Vareed,# 1 , ¤a Vadiraja B. Bhat,# 3 , ¤b Christopher Thompson, 3 Vihas T. Vasu, 1 Damian Fermin, 4 Hyungwon Choi, 3 Chad J. Creighton, 7 Sitaram Gayatri, 1 , 8 Ling Lan, 5 Nagireddy Putluri, 1 , ¤a Gagan Singh Thangjam, 1 Punit Kaur, 3 Mohsen Shabahang, 3 Judith G. Giri, 9 Alexey I. Nesvizhskii, 4 Alexander A. A. Asea, 3 Anil G. Cashikar, 1 , 2 Arundhati Rao, 3 , ¶ James McLoughlin, 6 , ¶ and Arun Sreekumar 1 , 6

    1 Department of Biochemistry and Molecular Biology and Cancer…

    Shaiju K. Vareed,# 1 , ¤a Vadiraja B. Bhat,# 3 , ¤b Christopher Thompson, 3 Vihas T. Vasu, 1 Damian Fermin, 4 Hyungwon Choi, 3 Chad J. Creighton, 7 Sitaram Gayatri, 1 , 8 Ling Lan, 5 Nagireddy Putluri, 1 , ¤a Gagan Singh Thangjam, 1 Punit Kaur, 3 Mohsen Shabahang, 3 Judith G. Giri, 9 Alexey I. Nesvizhskii, 4 Alexander A. A. Asea, 3 Anil G. Cashikar, 1 , 2 Arundhati Rao, 3 , ¶ James McLoughlin, 6 , ¶ and Arun Sreekumar 1 , 6

    1 Department of Biochemistry and Molecular Biology and Cancer Center, Medical College of Georgia, Augusta, Georgia, United States of America,
    2 Center for Molecular Chaperones & Radiobiology, Medical College of Georgia, Augusta, Georgia, United States of America,
    3 Department of Pathology, Scott & White Hospital, Temple, Texas, United States of America,
    4 Department of Pathology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America,
    5 Department of Biostatistics, Medical College of Georgia, Augusta, Georgia, United States of America,
    6 Department of Surgical Oncology, Medical College of Georgia, Augusta, Georgia, United States of America,
    7 Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, Texas, United States of America,
    8 Illinois Institute of Technology, Chicago, Illinois, United States of America,
    9 Tumor Bank Department of Pathology, Medical College of Georgia, Augusta, Georgia, United States of America,
    Sun Yat-sen University Medical School, China
    #Contributed equally.
    * E-mail: ude.mcb@amukeers

    See publication

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