We are hiring a bioinformaticist to support the rapidly growing portfolio at NIH's CARD through DT. Awesome opportunity to work with some of great collaborators like Cory Weller, Kendall Van Keuren-Jensen, Xylena Reed and Elise Marsan, PhD. Please see the advert below. https://lnkd.in/eXaRQx-j #bioinformatics #opportunity #openscience
DataTecnica LLC
Software Development
Washington, DC 1,280 followers
Data science and technology for healthcare.
About us
CURATE | ANALYZE | TRANSLATE | COMMUNICATE | INNOVATE Our goal is building better healthcare by accelerating innovation and maximizing the potential of scientific communities. We are a diverse team with integrative expertise from all the essential areas of data science and technology to advance healthcare. From data science (machine learning, statistics, bioinformatics, and epidemiology) to computer science (distributed systems, high-performance computing, and human-computer interaction) to biology (genetics and multi-omics) and medicine (imaging, neurology and public health). Together with our partners and clients, we are innovating and tackling a broad range of problems in global healthcare, from mental health, aging, diabetes, and neurological disorders to hospital administration and diagnostic tools. We are staunch advocates of open science, striving to make data and code easily accessible to the scientific community.
- Website
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https://www.datatecnica.com/
External link for DataTecnica LLC
- Industry
- Software Development
- Company size
- 11-50 employees
- Headquarters
- Washington, DC
- Type
- Partnership
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Washington, DC, US
Employees at DataTecnica LLC
Updates
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Great job from the entire CARD and DataTecnica LLC teams at the NIA Annual retreat. Exciting presentation from Owen Bianchi filling in for Benjamin Danek showcasing CARD.AI, the automated dementia research assistant the team has been working on to improve knowledge transfer and decrease research activation energy for the NIH's Center for Alzheimer's and Related Dementias. In the image below he shows massive gains after switching from pinecone to BM25 that enhance RAG accuracy significantly. CARD.AI is a hyper-collaborative effort with many team members contributing such as Chelsea Alvarado, Maya W., Andy Henrie, Andrew Singleton, Cory Weller, Mary Makarious, Gracelyn Hill, Anant Dadu, Mathew Koretsky, Hampton Leonard, Hirotaka Iwaki, Nicole Kuznetsov, Syed Islamuddin Shah, Shekoofeh Mokhtari, Daniel Khashabi and Faraz Faghri.
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OmicSynth platform for genetically derived therapeutic targets has been updated, too much traffic so we had to upgrade to here ... https://lnkd.in/e2NJf5pv Check out the paper here ... https://lnkd.in/emi7u8kN Great work from Chelsea Alvarado and the team! #openscience
Streamlit
omicsynth-streamlit-htco5r3hya-uc.a.run.app
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DataTecnica LLC reposted this
Lucky to team with the amazing Mary Makarious to talk data engineering for accelerating #openscience at Aligning Science Across Parkinson’s | ASAP GP regional meet in Cartagena. Sidenote, the dual monitors are quite bright. 🫥 📸 Andrew Singleton
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Check out our blog post for a quick summary of this recent publication in Nature Reviews Drug Discovery. #openscience to accelerate #precisionmedicine ! https://lnkd.in/e6YcSN_G
Open science accelerates precision medicine — Datatecnica
datatecnica.com
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New community tooling for mass spectrometry based proteomics available for testing. Take the web app for a test run with your data!
Check out the beta of our end to end mass-spect proteomics pipeline - ProtPipe. QC --> results with harmonized data in between. Links and graphical summary below. Exceptional work from Ziyi Li, Cory Weller, Syed Islamuddin Shah, Nicholas Johnson, Colleen Bereda, Dennis Dickson, Mark Cookson, Michael Ward, Andrew Singleton and Yue (Andy) Qi. Team effort from NIH's CARD, DataTecnica LLC and beyond! Preprint here. https://lnkd.in/dcg5DcVA App here. http://34.42.19.73:8501/# Feedback and testing always appreciated.
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https://lnkd.in/ePYAkCxe Check out our blog that summarizes the OmicSynth platform we built to nominate open source targets for neurodegeneration in collaboration with NIH's CARD, now published in the American Journal of Human Genetics! Much more development on this tool in the future. Great collaborative effort from Chelsea Alvarado, Mary Makarious, Cory Weller, Dan Vitale, Mathew Koretsky, Sara Bandrés Ciga, Kristin Levine, Hirotaka Iwaki, Andrew Singleton, Faraz Faghri, Mike Nalls and Hampton Leonard.
OmicSynth proof of concept paper out in AJHG! — Datatecnica
datatecnica.com
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Check out our blogpost on GenoTools (open release) V1. End-to-end cloud-based genetics at-scale, made easy! Find it on pip! https://lnkd.in/ehYyP2dW
GenoTools v1 now on pip! — Datatecnica
datatecnica.com
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https://lnkd.in/gYE2Ni5f Check out our blog on automated common data element harmonization using generative AI. This saves months of analyst time and facilitates rapid data harmonization across silos, decreasing the activation energy for research!
GenAI for harmonizing common data elements (CDEs). — Datatecnica
datatecnica.com
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Keeping your data safe from the US to Switzerland, Europe, the UK and beyond. Publishing our privacy policy as part of GDPR certifications. Linked below if interested. https://lnkd.in/eHF_SYfp
Data privacy policy and GDPR — Datatecnica
datatecnica.com