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PCB3063-Sec005 Fall2015 Syllabus
PCB3063-Sec005 Fall2015 Syllabus
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GENERAL GENETICS
PCB 3063-Sec005/BSC 6932
FALL 2015
Course Objectives:
The purpose of this course is to introduce you to the fundamental concepts of genetics.
We will cover each of the three major areas of the discipline:
1. Classical genetics: the rules that govern inheritance of hereditary traits
2. Molecular genetics: the study of the genetic material
3. Population/evolutionary genetics: the study of genetic variation in populations.
Lectures:
Instructor:
Office:
Hours:
Phone:
Textbook:
You will have the option to purchase access to McGraw-Hill Education Connect, a teaching
and learning platform. Connect contains an interactive e-book (SmartBook), so you are not required to
have a printed text if you do not want one.
GENERAL INFORMATION
1. Grade Determination:
I will make every effort to grade this course objectively and fairly. Your
grade will be based on examinations (80%), and class attendance &
participation (20%). There will be four midterm exams and a final. The first
midterm and final exam are mandatory. The lowest of the three remaining
midterms will be dropped, and the others will not all weigh equally! The
overall course grade will be determined as such:
FINAL exam
Higher two midterms
Lowest midterm
Attendance & participation
30%
40% (20% each)
10%
20%
The El-Rady plus/minus system will be used in this course. The following letter grades are guaranteed if
you accumulate the total number of points indicated for that grade.
A+ = 96%+
B+ = 84%+
C+ = 74%+
D+ = 64%+
; A = 90%+
; B = 80%+
; C = 70%+
; D = 60%+
F 57%
; A = 88%+
; B = 78%+
; C = 68%+
; D = 58%+
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2. Examinations:
All exams are of the multiple-choice variety. Questions are derived primarily from the lectures,
with additional questions taken from assigned readings. The questions will require some memorization,
some application of information in a new context as well as problem solving. The four midterm exams
are independent of one another, with each covering new material. Each will consist of 30 questions, and
you have the entire period to finish it. The final exam will have 60 questions (including some T/F). It is
semi-comprehensive, and includes the material that has not been already tested.
Schedule
Midterm I
Midterm II
Midterm III
Midterm IV
Final Exam
Thursday, September 24
Tuesday, October 13
Tuesday, November 3
Tuesday, November 24
Tuesday, December 8 (12:30-2:30)
You must bring a #2 pencil, and your student ID to each exam (scantron sheets will be provided).
You may use simple calculators during exams (e.g. calculators that can add, subtract, multiply
and divide), but you are responsible to bring your own calculator (no sharing during exams).
Calculators that are programmable, have downloading capabilities or extensive alphanumeric
capabilities may not be used during exams.
If you are found cheating on any exam you will automatically receive a grade of "FF" for the course. This
grade denotes "failure due to cheating", and becomes a permanent part of your transcript.
Exam grades will be posted on Canvas. All questions regarding the grading of exams should be directed
to me within one week after the posting of grades after this period, no exam grade will be changed. I
welcome and encourage legitimate inquiries concerning the grading of specific questions on exams.
However, please do not come to my office fishing for points. For example, you are 2 points from a
higher letter grade and come in to question each and every lost point hoping that you might be lucky and
get those 2 points.
I will retain questionnaires for two weeks from the date of the exam. Scantron sheets on the other hand,
will be retained for 60 days from the date of the final examination. Final grades not disputed within 60
days from their assignment will be considered final and no grievance may be filed.
Make-Up Examinations: A student could choose to miss any one of midterm exams II-IV. I do not have
to be informed of this in advance. That exam would simply act as your dropped grade. If on the other
hand, a student misses any midterm for a legitimate reason beyond their control (such as illness, death in
the immediate family, jury duty, day of religious observance, etc.) the student can take a make-up exam.
In this case, the student will have to contact me by email or phone within 24 hours of the missed exam.
S/he also has to provide me with the appropriate documentation no later than one week from the
scheduled date of the exam. The make-up exam will consist of an objective part (multiple-choice and
True/False questions), as well as a subjective part (definitions, fill-in-the-blanks, problems, etc.)
To accommodate the needs of students, but at the same time avoiding unacceptable burdens on
limited time and resources, sanctioned make-up exams will be given as follows:
Make-Up for Midterm I
Make-Up for Midterm II
Make-Up for Midterm III
Make-Up for Midterm IV
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Use of cell phones and beepers in class is DISTRACTING and DISCOURTEOUS. Please turn
them off or put them on vibrate mode.
Please try to be on time and remain for the entire period. Arriving late and/or leaving early is
inconsiderate of your colleagues and instructor. Plus, you will lose valuable clicker points!
Students who anticipate the necessity of being absent from class due to the observation of a
major religious observance must provide notice of the date(s) to me, in writing, by the second
class meeting.
In the event of an emergency, it may be necessary for USF to suspend normal operations. During this
time, USF may opt to continue delivery of instruction through methods that include but are not limited to:
Canvas, Elluminate, Skype, and email messaging and/or an alternate schedule. Its the responsibility of the
student to monitor the Canvas site for each class for course specific communication, and the main USF,
College, and department websites, emails, and MoBull messages for important general information.
4. Course Website:
A Canvas website has been developed for this course. To access it, please visit https://my.usf.edu.
The PCB 3063 website contains a variety of course-related materials including the syllabus, practice
quizzes, and links to Genetics Web sources. It contains a variety of communication tools, including
chat and Discussion Boards. The latter is a good way to ask and/or answer questions about the course,
coordinate studying, and exchange ideas about genetics-related topics. I will use the website to post
important class announcements throughout the semester.
The website will also contain my lecture notes. These are not necessarily comprehensive, but
they will greatly assist you in following the material during lectures so that you can think more and copy
less. I will assume you have the notes with you when delivering the lectures.
5. M.E.E.T Sessions:
I will hold M.E.E.T (Meet El-Rady for Extra Tutelage) sessions before exams.
These are
basically review sessions, which also offer you an opportunity to ask questions
about any of the material in the course. Your attendance at these discussions is
optional, but I do strongly encourage you to attend. These sessions will likely be
held on Friday afternoons (locations and times will be announced in class).
6. Office Hours:
Formal office hours are Tue 9:30-11:00, and Thu 10:30-12:00. I will also stick around after each
class to address any lingering questions or problems. If you need help and you cannot see me during
these office hours, you can make an appointment by sending me an email with several possible times. I
will then consult my calendar and confirm an appointment.
I will also be available on certain days for lunch at the Marshall Center, Juniper-Poplar Hall,
Subway, or other fine dining establishments on campus. Please feel free to join me at my table and talk
science (sports or stuff)! These informal office hours can also be scheduled in advance, especially if there
is a number of you and if I am treated to lunch!
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9. Special Accommodations:
If you are a student with documented special needs because of any kind of a disability, please feel
free to see me for a confidential discussion. You must bring a current Memorandum of Accommodations
from the Students with Disabilities Services. Please visit http://www.sds.usf.edu or call 974-4309 for
more information. I will gladly work with you to accommodate your particular situation.
10. Sexual Misconduct/Sexual Harassment Reporting:
USF is committed to providing an environment free from sex discrimination, including sexual
harassment and sexual violence (USF System Policy 0-004). The USF Center for Victim Advocacy and
Violence Prevention is a confidential resource where you can talk about incidents of sexual harassment
and gender-based crimes including sexual assault, stalking, and domestic/relationship violence. This
confidential resource can help you without having to report your situation to either the Office of Student
Rights and Responsibilities (OSSR) or the Office of Diversity, Inclusion, and Equal Opportunity (DIEO),
unless you request that they make a report. Please be aware that in compliance with Title IX and under the
USF System Policy, educators must report incidents of sexual harassment and gender-based crimes
including sexual assault, stalking, and domestic/relationship violence. If you disclose any of these
situations in class, in papers, or to me personally, I am required to report it to OSSR or DIEO for
investigation. Contact the USF Center for Victim Advocacy and Violence Prevention: (813) 974-5757.
11. Dates to Remember:
Saturday, October 31
Thursday, November 26
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LECTURE SCHEDULE
The chapters we will cover will not be in sequence, but rather in the following order:
Chapter
Topic
History of Genetics
Overview of Genetics*
Mendelian Inheritance
22
25
Quantitative Genetics
10
11
DNA Replication
12
13
Translation of mRNA
14, 15
Gene Regulation
Non-Mendelian Inheritance
24
Population Genetics
18, 19
DNA Technology
20, 21
26
Evolutionary Genetics**
* Chapter 1 is a Reading Assignment. So will be a few selected topics from other chapters.
** Evolutionary genetics will also include discussions from three other chapters: Mutation (Ch. 18),
Transposition (Ch. 19), and Development (Ch. 25)
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