Professional Documents
Culture Documents
Biological Opinions For The Sacramento-San Joaquin Delta
Biological Opinions For The Sacramento-San Joaquin Delta
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Summary
For decades biologists, water users, and lawmakers (both federal and state) have attempted to
craft a system that meets the needs of California water users while ensuring sufficient usable
water for fish. Under Californias hybrid system of appropriative water rights, users are issued
permits for water diverted from rivers and streams regardless of the users proximity to the source
of water. The state of California has issued permits to the Bureau of Reclamation (the Bureau) to
store, divert, and deliver water from the federal Central Valley Project (CVP), which consists of
facilities on the Sacramento, Stanislaus, and San Joaquin Rivers, including the Shasta, New
Melones, and Friant Dams. The Bureau diverts CVP and State Water Project (SWP) water from
the southern portion of the Sacramento-San Joaquin Delta to the southern part of California.
Although the amount of water available from the CVP/SWP is relatively constant,
notwithstanding periods of drought and periods of excessive rain (e.g., El Nio years), the amount
of water diverted from major rivers and their tributaries has increased over time, and fish
populations have declined.
In the CVP/SWP watershed, the Endangered Species Act (ESA) protects multiple species or
populations of fish, including the endangered Sacramento River winter-run Chinook salmon, the
threatened Central Valley spring-run Chinook salmon, the threatened Central Valley steelhead, the
threatened Southern population of North American green sturgeon, and the threatened delta smelt.
The ESA requires the Bureau to consult with the Fish and Wildlife Service (FWS) or the National
Marine Fisheries Service (NMFS) (together, the Services) to see whether planned actions are
likely to jeopardize a listed species or damage critical habitat. (FWS is consulted for impacts
related to the Delta smelt. NMFS is consulted on potential impacts to salmon.) The consultation
process concludes with the Service issuing a biological opinion (BiOp) along with an incidental
take statement, allowing the federal action to proceed without prosecution for incidental harm to
listed species. If the Service finds the action is likely to jeopardize a listed species, a jeopardy
BiOp is issued, which will include reasonable and prudent alternatives (RPAs) to the planned
action to avoid extinction of a species. Otherwise a no-jeopardy BiOp is issued.
In 2004, the Long-Term Central Valley Project and State Water Project Operations Criteria and
Plan (OCAP) was issued by California and the Bureau to meet the systems water needs. Pursuant
to OCAP, the Services issued both jeopardy and no-jeopardy opinions. Lawsuits challenged both
types of BiOp. If jeopardy was found, water users argued that the BiOp failed to consider impacts
on junior water users sufficiently. If no jeopardy was found, environmentalists and fishermen
argued that the BiOp did not fully consider the extent of the harm to the species. Judge Oliver W.
Wanger of the federal court for the Eastern District of California has found the BiOps or the RPAs
to be inadequate for various reasons, including failing to comply with the National Environmental
Policy Act (NEPA). (He retired from the bench at the end of September 2011.) Some of those
decisions have since been appealed to the Ninth Circuit. This report summarizes the proceedings
on the BiOps issued since 2004.
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Contents
Proceedings Related to OCAP BiOps.............................................................................................. 1
Appendixes
Appendix A. List of Acronyms and Abbreviations Used in Table................................................... 8
Appendix B. Brief Description of Cases in Table............................................................................ 9
Contacts
Author Contact Information............................................................................................................. 9
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Date
Document
Title
Summary
1/3/07
Order Denying
Motions for
Dismissal,
Remand, and
Stay
NRDC v. Kempthorne,
506 F. Supp. 2d 322
(E.D. Cal. 2007)
5/25/07
Order
Remanding 2005
FWS BiOp
6/15/07
Dismissing
NEPA Claim
NRDC v. Kempthorne,
1:05-cv-1207, 2007 WL
1989015 (E.D. Cal. July
3, 2007)
7/3/07
Denying TRO
to Reduce
Water Flow
Provided by
FWS BiOp
NRDC v. Kempthorne,
1:05-cv-1207, 2007 WL
4462391 (E.D. Cal. Dec.
14, 2007)
12/14/07
Order granting
Interim
Remedial Relief
for Flow Limits
The court granted remedial relief that set flow limits and
triggering events. The court also required that FWS
draft a new BiOp and stated that remedial relief would
remain in place until the new BiOp was complete.
5/20/08
Remanding 2004
NMFS BiOp
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
7/18/08
Denying
Plaintiffs
Requests for
Emergency
Interim
Remedies while
New NMFS
BiOp Being
Prepared
NRDC v. Kempthorne,
1:05-cv-01207, 2008 WL
4369308 (E.D. Cal. Sept.
22, 2008)
9/22/08
Order
Extending Time
for FWS to
Complete
Revised Delta
Smelt BiOp
BiOp
12/15/08
FWS BiOp
Issued
Delta Smelt
Consolidated Cases, No.
1:09-cv-407 (E.D. Cal.
2009)
3/3/09
Complaint Filed
that Became
Delta Smelt
Consolidated
Cases
NRDC v. Kempthorne,
621 F. Supp. 2d 954
(E.D. Cal. 2009)
4/27/09
Renewal of
Senior Water
Rights
Contracts Not
Subject to ESA
Delta Smelt
Consolidated Cases,
1:09-CV-407, 2009 WL
1575169 (E.D. Cal. May
29, 2009)
5/29/09
Granting
Preliminary
Injunction to
Halt FWS BiOp
RPA
Component 2
BiOp
6/4/09
NMFS BiOp
Issued
Consolidated Salmonid
Cases, 1:09-cv-1053
(E.D. Cal. 2009)
6/15/09
Complaint Filed
that Became
Consolidated
Salmonid Cases
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
NRDC v. Kempthorne,
1:05-cv-01207, 2009 WL
2849626 (E.D. Cal. Sept.
1, 2009)
9/1/09
Renewal of
CVPIA
Contracts Not
Subject to ESA
Consolid. Salmonid
Cases, 1:09-cv-1053
(E.D. Cal. 2009)
9/3/09
Granting
Intervention for
DefendantIntervenors
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2009)
9/4/09
Amended
Complaint
NRDC v. Kempthorne,
1:05-cv-1207 (E.D. Cal.
2009)
9/23/09
Judgment
Delta Smelt
Consolidated Cases, 666
F. Supp. 2d 1137 (E.D.
Cal. 2009)
10/15/09
Delta Smelt
Consolidated Cases, 686
F. Supp. 2d 1026 (E.D.
Cal. 2009)
11/13/09
Requiring
Bureau to
Comply with
NEPA for FWS
BiOp RPAs
Coalition for a
Sustainable Delta v. U.S.
Fish and Wildlife Service,
1:09-cv-480, 2009 WL
3857417 (E.D. Cal.
2009)
11/17/09
Consolidates
2008 BiOp
Claims with
Other Delta
Smelt Cases
1/27/10
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2010)
1/27/10
2/5/10
Granting TRO
for NMFS BiOp
RPA IV.2.3
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2010)
2/5/10
Denying TRO
for FWS BiOp
The court denied the TRO for the 2008 FWS BiOp. No
smelt were spotted in the area of the pumps; therefore,
the federal government was not implementing the RPA
that was being challenged.
Delta Smelt
Consolidated Cases, 693
F. Supp. 2d 1145 (E.D.
Cal. 2010)
2/12/10
Denying Second
Motion for TRO
for FWS BiOp
Component 1
2/22/10
3/5/10
Requiring
Bureau to
Comply with
NEPA for NMFS
BiOp RPAs
(Order issued
3/18/10)
5/18/10
Granting
Preliminary
Injunction
Against
Implementation
of 2009 NMFS
BiOp RPA IV.2.1
and IV.2.3
(Order Issued
5/27/10)
Delta Smelt
Consolidated Cases, 717
F. Supp. 2d 1021 (E.D.
Cal. 2010)
5/27/10
Preliminary
Injunction
Against
Implementation
of 2008 FWS
BiOp
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
6/22/10
Operational
Plan
Delta Smelt
Consolidated Cases, 760
F. Supp. 2d 855 (E.D.
Cal. 2010)
12/14/10
Decision
Remanding 2008
FWS BiOp
(Order Issued
12/23/2010)
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
2/2/11
Stipulation
Settling
Attorneys Fees
2/3/11
Motion for
Preliminary
Injunction
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
2/24/11
Proposed
Interim Remedy
Through
6/30/2011
3/25/11
Upholding ESA
Constitutionality
3/28/11
Notification of
Court
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
3/29/11
Judgment ending
Delta Smelt
Consolidated
Cases
3/30/11
Order
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
4/7/11
Notice of
Appeal Filed
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
5/4/11
Amended
Judgment
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
6/8/11
Motion for
Preliminary
Injunction Filed
6/10/11
Motions for
TRO and
Preliminary
Injunction
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
6/15/11
Order
6/22/11
Petition for a
Writ of
Certiorari Filed
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
6/24/11
Jurisdiction to
Hear Motion for
Preliminary
Injunction
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
6/30/11
Notice of
Appeal Filed
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
7/1/11
Notice of
Appeal Filed
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
9/2/11
Preliminary
Injunction
9/6/11
Written
Decision of 6/15
Denial of
Preliminary
Injunction
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011) (Ninth Cir. Doc.
No. 11-17143)
9/6/11
Notice of
Appeal
Filed/Motion for
Stay Filed
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011)
9/13/11
Amended
Order
9/20/11
Memorandum
Decision on
Summary
Judgment
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Case Name
Date
Document
Title
Summary
Delta Smelt
Consolidated Cases,
1:09-cv-407 (E.D. Cal.
2011
9/26/11
Second
Amended
Order/Partial
Stay
9/29/11
Order
10/31/11
12/12/11
Final Judgment
1/19/12
Notice of
Appeal
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Bureau
cfs
CVP
CVPIA
DOI
E.D. Cal.
EIS
ESA
FWS
NEPA
NMFS
NRDC
OCAP
RPA
S. Ct.
SWP
TRO
9th Cir.
U.S. Federal Court of Appeals for the Ninth Circuit (which includes the Eastern
District of California)
X2
Geographical location where the isohaline levels of a river are at 2 parts per
thousand. Setting X2 Targets requires changing freshwater flow levels in order
to push that concentration level farther out to the estuaries.
Biological Opinions for the Sacramento-San Joaquin Delta: A Case Law Summary
Basis of Claim(s)