Professional Documents
Culture Documents
Qi 2015
Qi 2015
Scientia Horticulturae
journal homepage:www.elsevier.com/locate/scihorti
a,b a a a a
Zhenyu Qi , Junxing Li , Muhammad Ammar Raza , Xiaoxia Zou , Liwen Cao , Linli
a a,∗
Rao , Liping Chen
a
Institute of Vegetable Science, Zhejiang University, Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China,
Hangzhou 310058, China
b
Agricultural Experiment Station, Zhejiang University, Hangzhou 310058, China
Article history: Melon (Cucumis melo L.), an important cash crop, is cultivated worldwide. Fruit cracking frequently occurs during ripening,
Received 29 January 2015 resulting in economic loss. Thus, increasing fruit cracking resistance is crucial in melon breeding. However, until recently,
Received in revised form 16 March 2015 few reports have described standard evaluation and identification methods for fruit cracking resistance or the genetic analysis
Accepted 1 April 2015 Available online 21 of this trait, hindering the development of crack-resistant melons. In the present study, a mixed major gene plus polygene
April 2015 inheritance model was used to analyse fruit cracking resistance in six generations (P 1 , P2 , F1 , B1 , B2 and F2 ) of melon,
using the cracking-susceptible variety ‘MOIN-10’ and the cracking-resistant variety ‘RE-33’ as parents. The results showed
Keywords: that the genetic model E-0, incorporating two additive–dominance–epitasis major genes plus an additive–dominance–epitasis
Melon polygene, is the best-fitting genetic model for fruit cracking resistance. The heritabilities of the major genes in the B 1 , B2 and
Fruit cracking resistance
Major gene plus polygene inheritance F2 populations for fruit cracking resistance were 46.24%, 59.19% and 57.98%, respectively, and the heritabilities of
Genetic analysis polygenes for this trait were 21.26%, 2.02% and 9.74%, respectively. Genetic variances in B 1 , B2 and F2 accounted for
67.51%, 61.19% and 67.73% of phenotypic variance, respectively, showing that fruit cracking resistance was controlled
through genetic factors and environmental influence. Thus, in melon breeding, selection for cracking resistance in early
generation melon is desirable.
1. Introduction resulting from increased fruit turgor pressure (Kamimura et al., 1972; Li et al.,
2007), associated with environmental conditions (Gibert et al., 2007; Dürdane
Melon (Cucumis melo L.) is an important cucurbit crop, culti-vated et al., 2011) and cultivation meas-ures (Liu et al., 2010; Lichter et al., 2002).
worldwide with a high diversity of varieties (Pitrat et al., 2000; Lin, 2012). To some extent, the cultivation and physiological measures to alleviate the
During the ripening period, melon fruits are prone to splitting and cracking, severity of cracking reduce production losses resulting from fruit cracking
severely reducing market value, causing economic loss and negatively (Shimizu, 2005). However, it is difficult to solve this problem funda-mentally.
influencing the development of the melon industry (Wu et al., 2008; Wessel- Breeding varieties with resistance to cracking has been proposed as an
Beaver, 2011). Therefore, studies concerning the reduction of fruit cracking effective solution (Reynard, 1960), while genetic analysis of fruit cracking
have important significance. resistance is a prerequisite for the cultiva-tion of resistant varieties. Resistance
to fruit cracking in tomatoes is a quantitative trait that is controlled through
Fruit cracking during fruit development has previously been described in multiple genes and is strongly affected by environmental factors (Young,
several crops and fruits (Peet, 1992; Lane et al., 2000; Li et al., 2010; Lal et 1960; Prashar and Lambeth, 1960; Avdeev, 1980; Scott and Barten, 1992;
al., 2011; Khanal et al., 2011; Peng et al., 2012; Chen et al., 2012a,b ). It has Emmons and Scott, 1998; Wahyuni, 2014). In watermelon, resis-tance to fruit
been reported that fruit cracking reflects an imbalance between exocarp and cracking is controlled through a few major genes and modified through
flesh growth polygenes (Jiang et al., 2009).
However, in melon, the genetic
causes of fruit cracking resistance remain unknown.
∗
Corresponding author. Tel.: +86 571 88982006. E-mail
address: [email protected] (L. Chen).
http://dx.doi.org/10.1016/j.scienta.2015.04.004 0304-
4238/© 2015 Elsevier B.V. All rights reserved.
Z. Qi et al. / Scientia Horticulturae 189 (2015) 168–174 169
It was essential to establish identification methods and eval-uation In the present study, muskmelon varieties RE-33, with high resistance to
standards for fruit cracking resistance prior to genetic analysis. Currently, cracking, and MOIN-10, with cracking susceptibility, were used as the parents
identification methods and evaluation stan-dards for resistance have only been in a cross. Six generations, P1 , P2 , F1 , B1 , B2 and F2 , were obtained. The
reported for pepper (Johnson and Knavel, 1990), watermelon (Sugiyama et identification methods and evaluation standards for resistance were
al., 1998; Jiang et al., 2010), tomato and apple (White and Whatley, 1955; established according to the classi-fication of fruit cracking based on the
Voisey and Lyall, 1965; Kamimura, 1977 ), and these standards and methods number, length and depth of the cracks. The genetic analysis and identification
might not be suitable for melon, as the texture and structure of melon fruit are of a genetic model were performed to determine the pattern of gene action of
different from the fruits of those crops. melon fruit cracking resistance. Moreover, the major genetic effects and
genetic force were estimated. These results might provide a basis for further
QTL analysis and practical marker-assisted selec-tion breeding for fruit
Several methods have been used for the genetic analysis of quan-titative cracking resistance in melon.
traits (Zalapa et al., 2008; Fita et al., 2008; Zhang et al., 2007), but these
methods only estimate the overall genetic effect and not the effects of
individual loci. In recent years, an analysis method using a major gene plus
polygene mixed genetic model has been developed for plants (Wang and Gai, 2. Materials and methods
1997, 1998; Gai et al., 2003). In contrast with previous methods, this
technique detects and identifies major genes and polygenes and estimates 2.1. Materials
genetic parameters. This gene model has been widely used in various crops,
such as rice (Wang et al., 1999), cotton (Yuan et al., 2002), rape (Zhang et al., A cross was made between muskmelon RE-33 (C. melo ssp. melo var.
2006), sorghum (Guan et al., 2012), Chinese cabbage (Zhuo et al., 2006), cantalupensis Naudin), an inbred line with high resistance to cracking, as the
tomato (Li et al., 2006), pepper (Chen et al., 2012a,b), mustard (Zhang et al., female parent (P1 ) and MOIN-10, an inbred line with cracking susceptibility,
2014), wheat (Ren et al., 2008) and cabbage (Su et al., 2012), for the genetic
as the male parent (P2 ; Fig. 1). MOIN-10, a succulent, crisp muskmelon
analysis of important agro-nomic traits. The results derived from this method
variety, with excellent and unique flavour, derived from a cross between MO-
were consistent with those from quantitative trait loci (QTL) analysis (Wang 21 (C. melo ssp. agrestis var. momordica Roxburgh) and IN-56 (C. melo ssp.
et al., 2008). This method has been demonstrated as a cost-effective tech- melo var. inodorus Jacquin), is susceptible and apt to cracking during the
nique for the study of complex quantitative traits. However, there are no ripening period in either spring or autumn cultivation. MO-21 and IN-56 were
reports concerning the application of the major gene plus polygene mixed supplied from the Vegetable Research Institute of Zhejiang University, and
genetic model for the genetic analysis of melon, and this method was used to RE-33 was obtained from the Mitsuo Seed Com-pany of Zhejiang. F 1 plants
analyse fruit cracking resistance in melon. were generated after a cross conducted in the spring of 2013 in a plastic
greenhouse at Huajiachi Cam-pus, Zhejiang University, and F 2 , B1 and B2
seedlings were obtained
Fig. 1. Two parents of melon and the grade of fruit cracking. Note: (a) fruit of ‘MOIN-10’; (b) fruit of F1 hybrid in “‘RE-33’ × ‘MOIN-10”’; (c): fruit of ‘RE-33’; (d) fruit cracking grade 0; (e) fruit
cracking grade 1; (f) fruit cracking grade 2; (g) fruit cracking grade 3; (h) fruit cracking grade 4 and (i) fruit cracking grade 5.
170 Z. Qi et al. / Scientia Horticulturae 189 (2015) 168–174
Table 1 The computer program was obtained from Dr. Zhang Yuan-
Grades and characteristics of fruit cracking in melons. ming, (Soybean Research Center of Nanjing Agricultural University)
Grade Number of Number of cracks Number of cracks (http://jpkc.njau.edu.cn/swtj/Upfiles/2007718202726314.zip).
cracks greater than l/2 of deeper than 1/2 of
circumference fruit flesh thickness
3. Results
Grade 0 0 0 0
Grade 1 [1,+∞) 0 0
Grade 2 [1,+∞) 1 0 3.1. Establishment of identification method and evaluation
Grade 3 [1,+∞) 1 1 standard for resistance in melon
Grade 4 [2,+∞) [2, +∞) 1
Grade 5 [2,+∞) [2, +∞) [2, +∞)
The grade of fruit cracking was classified into six levels (0–5), while the
Note: The circumference was calculated as the average value of two vertical meas-ures, and degree of cracking was associated with the number, length and depth of the
cracks smaller than l/4 of the circumference of the fruit skin were neglected. The fruit flesh cracks. Particularly, the depth of the cracks corresponded well with the degree
thickness was calculated as the average value of the thick-ness at the bottom and middle. All
of cracking (Table 1, Fig. 1). From grade 0 to 5, we observed an increase in
numbers expressed as intervals in the table are integers.
the num-ber, length and depth of the cracks (Fig. 1); these characteristics
corresponded to the grades of fruit cracking listed in Table 1. Furthermore, the
grade of fruit cracking was based on the three different characteristics listed in
through self-fertilization and backcrossing in the autumn of the same year. Table 1. The first characteristic indicated the total number of cracks (only
crack lengths greater than 1/4 of the circumference were included). we
calculated the circumference from the average value of two vertical measures
2.2. Investigation of traits and calculation of resistance index of fruit of the circumference of the fruit skin. The second characteristic indicated the
cracking number of cracks longer than l/2 of the circum-ference. The third
characteristic indicated the number of cracks deeper than l/2 of the fruit flesh
On March 5, 2014, P1 , P2 , F1 , B1 , B2 and F2 were sown, and the thickness, calculated from the average value of the fruit flesh thickness at the
seedlings were transplanted 3 weeks later. A randomized complete block bottom and middle.
design with three replicates was used for the non-segregating generations (P 1 ,
P2 and F1 ). The numbers of P1 , P2 , F1 , B1 , B2 and F2 seedlings were 36,
42, 42, 172, 183 and 229, respectively, with separation at 40 cm within and 90 By classifying fruit cracking in melons, we established a spe-cific
cm between the rows (30,000 plants/ha). The general management levels, identification method and evaluation standard for cracking resistance. The
water, fertilizer and ventilation were uniform, and drip irrigation was fruit cracking resistance index for comparing melon genotypes was calculated
employed. Stan-dard cultivation practices, vertical culture, single-vine
using the following formula:
pruning and 28th leaf topping were conducted during different growth
periods. Pollination was performed in the morning from the ninth to the 12th Resistance index of fruit cracking (RIFC)
nodes, and precisely two fruits were set on each plant.
100 (quantity of a grade × the grade) 100%.
High water saturation of soil was maintained at the matura-tion period = − (number of fruits scored × 5) ×
(approximately 32 days after pollination) to induce fruit cracking. Cracking
was scored every morning when the fruits were beginning to crack, including
the number, length and depth of the cracks, bottom and middle fruit flesh
3.2. Distributions of fruit cracking resistance score in six
thickness and vertical cir-cumference in two areas using Mm tape. Each
populations
cracked fruit was individually examined and classified based on the grade of
fruit cracking (Fig. 1; Table 1). Fruit without cracks received a grade of 0 at
Average RIFC values were compared among the six populations. The
60 days after pollination. The resistance index of fruit cracking (RIFC) was
calculated based on the grade of fruit cracking. average RIFC values of parents P1 and P2 were 92.22 and 16.42, respectively
(Table 2). However, the average RIFC value of F1 was 38.81, a value less than
half of the summed RIFC values of the two parents and closer to the RIFC
value of the male parent MOIN-10, indicating that fruit cracking susceptibility
2.3. Genetic analysis
was partially dominant to resistance in this cross combination. The average
SPSS (version 13.0) was used to analyse the six generations of melon. The RIFC values of the B1 , B2 and F2 populations were 73.37, 30.32 and 51.31,
mixed major gene plus polygene inheritance model was used to analyse fruit respectively, and the variance of the three segregating genera-tions was large,
suggesting that there were wide variations in these populations.
cracking resistance in the six genera-tions (P1 , P2 , F1 , B1 , B2 and F2 ) of
melon. The parameters of various generations and component distributions
were estimated using a maximum likelihood function, with an iterated
expectation and conditional maximization algorithm (IECM). The optimal
model was selected using the Akaike information criterion (AIC), and a test of Table 2
goodness-of-fit for the best genetic model was performed. The first- and Frequency distribution of the index of fruit resistance to crack in six population from “‘RE-33’ ×
second-order genetic parameters of the optimal genetic model were estimated ‘MOIN-10”’.
using the least-squares method according to Wang (1996). The heritabilities Generation Index of fruit cracking resistance Mean index
of the major genes and polygenes were estimated as: of fruit
0 10 20 30 40 50 60 70 80 90 100 cracking resistance
2 2 2 P1 1 2 5 8 20 92.22
Major gene heritability: h mg = mg / p ; polygene heritability:
P2 13 5 10 12 2 16.42
2 2 2
h pg = pg / p . F1 1 1 14 16 7 2 1 38.81
2 2 2 B1 1 2 1 4 13 17 26 33 32 26 17 73.37
p : phenotypic variance; mg : major-gene variance; pg : polygenic B2 27 38 56 17 15 8 7 0 2 1 1 30.32
2 2
variance; h mg : major gene heritability; h pg : polygene heritability. F2 1 3 18 27 31 24 35 20 10 1 2
51.31
Z. Qi et al. / Scientia Horticulturae 189 (2015) 168–174 171
Fig. 2. Frequency distribution of the fruit cracking resistance traits in B1 , B2 and F2 populations. Note: a, b and c correspond to B1 , B2 , and F2 populations of “‘RE-33’ × ‘MOIN-10”’.
*
Indicates the lowest AIC values.
172 Z. Qi et al. / Scientia Horticulturae 189 (2015) 168–174
Table 4
Tests for goodness of fit model of fruit cracking resistance traits in different generations.
E-0 P1 0.441 (0.5068) 0.173(0.6771) 0.819 (0.3654) 0.6374 (<0.05)* 0.3038 (n = 36, CD(0.05) = 0.2332) (<0.05)*
F1 0.045 (0.8328) 0.221(0.6380) 1.133 (0.2871) 0.3583 (>0.05) 0.2211 (n = 42, CD(0.05) = 0.2150) (<0.05)*
P2 0.009 (0.9231) 0.626(0.4289) 7.785 (0.0053)* 0.4552 (>0.05) 0.2307 (n = 42, CD(0.05) = 0.2150) (<0.05)*
B1 0.221 (0.6381) 0.204(0.6512) 0.000 (0.9896) 0.3559 (>0.05) 0.1118 (n = 172, CD(0.05) = 0.1043) (<0.05)*
B2 4.210 (0.0402)* 5.927(0.0149)* 3.210 (0.0732) 1.2231 (<0.05)* 0.2163 (n = 183, CD(0.05) = 0.1011) (<0.05)*
F2 0.035 (0.8508) 0.094(0.7586) 0.251 (0.6164) 0.4000 (>0.05) 0.0966 (n = 229, CD(0.05) = 0.0903) (<0.05)*
E-1 P1 1.043 (0.3071) 0.662(0.4159) 0.492 (0.4830) 0.6995 (<0.05)* 0.3210 (n = 36, CD(0.05) = 0.2332) (<0.05)*
F1 0.639 (0.4239) 1.026(0.3111) 0.911 (0.3398) 0.4222 (>0.05) 0.2563 (n = 42, CD(0.05) = 0.2150) (<0.05)*
P2 0.417 (0.5185) 0.001(0.9811) 6.736 (0.0094)* 0.4488 (>0.05) 0.2482 (n = 42, CD(0.05) = 0.2150) (<0.05)*
B1 0.397 (0.5285) 0.372(0.5419) 0.000 (0.9990) 0.3776 (>0.05) 0.1184 (n = 172, CD(0.05) = 0.1043) (<0.05)*
B2 0.489 (0.4843) 1.506(0.2197) 4.842 (0.0278)* 0.9071 (<0.05)* 0.1874 (n = 183, CD(0.05) = 0.1011) (<0.05)*
F2 1.663 (0.1973) 1.729(0.1886) 0.070 (0.7908) 0.5565 (<0.05)* 0.1292 (n = 229, CD(0.05) = 0.0903) (<0.05)*
*
E-3 P1 1.777 (0.1826) 2.988(0.0839) 3.069 (0.0798) 0.731 (<0.05) 0.3638 (n = 36, CD(0.05) = 0.2332) (<0.05)*
F1 1.821 (0.1772) 2.307(0.1288) 0.722 (0.3954) 0.5433 (<0.05)* 0.2898 (n = 42, CD(0.05) = 0.2150) (<0.05)*
P2 0.351 (0.5535) 1.540(0.2146) 7.127 (0.0076)* 0.4824 (<0.05)* 0.2253 (n = 42, CD(0.05) = 0.2150) (<0.05)*
B1 17.344 (0.0000)* 16.192(0.0001)* 0.001 (0.9730) 2.068 (<0.05)
*
0.2241 (n = 172, CD(0.05) = 0.1043) (<0.05)*
B2 5.987 (0.0144)* 6.570(0.0104)* 0.602 (0.4377) 1.6412 (<0.05)* 0.2610 (n = 183, CD(0.05) = 0.1011) (<0.05)*
F2 0.000 (0.9912) 0.016(0.8991) 0.303 (0.5823) 0.4135 (>0.05) 0.1041 (n = 229, CD(0.05) = 0.0903) (<0.05)*
2 2 2 2 2 2 2
Note: U1 , U2 and U3 are the statistic of Uniformity test; n W is the statistic of Smirnov test; Dn is the statistic of Kolmogorov test. The probabilities are shown in the brackets of U1 , U2 and U3 ;
2
the threshold limit value of n W is 0.461 at 0.05 level.
*
Indicates significance at the 0.05 level.
3.4. Estimation of genetic parameters for the best-fitting model dominant and epistatic effects are important for the inheritance of melon fruit
cracking resistance.
The first- and second-order parameters of the E-0 model were estimated The results from second-order parameters showed that the heritabilities of
using the least-squares method (Table 5). The additive effects of the two 2
the major genes (h mg ) from the B1 , B2 and F2 populations were 46.24%,
major genes controlling cracking resistance were 8.1502 and 8.0989, 2
respectively, and the dominance effects were −13.5600 and −0.0462. The 59.19% and 57.98%, respectively, and the heritabilities of the polygenes (h pg
) were 21.26%, 2.02% and 9.74%, respectively. The genetic variances of the
potential ratio (ha/da) of the first major gene was −1.6338, indicating that the
dominant effect was greater than the additive effect. However, the potential B1 , B2 and F2 populations were 278.6305, 211.4700 and 281.4963,
respectively, accounting for 67.51%, 61.19% and 67.73%, respectively, of the
ratio (hb/db) of the second major gene was −0.0057, suggesting a lower domi-
nant effect. Clear interactions and epistatic effects were observed between the phenotypic vari-ance. The environmental variance of B 1 , B2 and F2
two major genes. The additive × additive effect (i) was 1.7779 and the populations was estimated as 134.1059 according to P1 , P2 and F1 , account-
dominance × dominance effect (l) was 26.1169. The additive × dominant ing for 32.49%, 38.81% and 32.27%, respectively, of the phenotypic variance.
interaction effect (jab ) between the two major genes was 5.9039, a value less These results suggested that fruit cracking resistance is controlled through
genetic factors, with a large effect of environ-mental factors, indicating that
than the dominance × additive inter-action effect (jba ), indicating that
selection for fruit cracking resistance in early generations is most efficient.
dominance × additive interaction effects contributed to melon cracking
resistance. Thus, additive,
4. Discussion
the depth of the cracks, which does not entirely reflect the degree of fruit B2 and F2 populations. Moreover, the obvious differences of heri-tability
cracking in melons. The identification methods and evalu-ation standards for among the populations was associated with the recessive effects of the major
cracking resistance used in the present study were thoroughly and carefully gene in resistance to cracking, consistent with previous studies in other crops
established through classifying fruit cracking according to the number, length (Li et al., 2006; Su et al., 2012; Yuan et al., 2002). These results indicate that
and depth of the cracks. melon fruit cracking resis-tance is dominated by main genes and modified
To date, explanations of fruit cracking have primarily focused on the through polygenes. In practical breeding, efficient selection should be
imbalance among ectocarp, mesocarp and endocarp growth resulting from conducted in early generations, reflecting the high heritability of major genes.
increasing fruit turgor pressure. Opera et al. (1996) reported that fruit with The increased genetic variation and heritability of major genes is favourable
cracking resistance consistently displayed a thick and elastic pericarp. A for molecular marker-assisted selection breeding.
tomato variety with cracking resis-tance was obtained through directional
selection for thick pericarp materials. In the present study, a crack-resistant Fruit cracking can emit fragrance and attract feeding animals, and seeds
parent, with a thick and elastic pericarp, was crossed with a susceptible par- can thereby be taken further afield. This trait is favourable for plant evolution
ent to improve the cracking resistance of melon. No cracking was observed
but disadvantageous for crop production and storage. Thus, breeding varieties
prior to the ripening period (32 days after pollination) in the B 1 , B2 and F2 with resistance to cracking will be the most effective solution (Fernández-
segregating populations, and subsequently the fruit of melon began to crack Trujillo et al., 2013). Encouraging results have been achieved in tomato
during the ripening period, suggest-ing that there is no direct relationship (Reynard, 1960) and persimmon (Yamada et al., 2002). However, in melon,
between pericarp scarring during the expansion period and fruit cracking breed-ing varieties with resistance to cracking have only recently been
during the ripen-ing period. The distributions of cracking resistance index in established. In the present study, we conducted basic research con-cerning
the B1 , B2 and F2 segregating populations showed that these individuals resistance to fruit cracking in melon. These results will provide a theoretical
displayed different degrees of resistance to fruit cracking, indicat-ing that reference for the QTL mapping and breeding of melon resistance to fruit
muskmelon can be used as a good breeding material for cracking resistance in cracking.
melon.
In the present study, the F1 generation, with an RIFC value skewed Acknowledgements
towards the susceptible parent, was obtained using the resistant parent RE-33
The author would like to thank Dr. Y. M. Zhang of the College of
hybridized with the susceptible parent MOIN-10. The RIFC of the B 2
Agriculture, Nanjing Agricultural University and Z. Z. Dong of the
generation following hybridization was also skewed towards the susceptible
parent. In addition, the two major genes controlling cracking resistance both Experimental Station, Zhejiang University for assistance and advice. Financial
showed neg-ative dominance effects (−13.56 and −0.0462), suggesting that assistance and research material were obtained from the Mitsuo Seed
cracking susceptibility had a greater dominant effect than resis-tance, Company of Zhejiang, China (NO. 588870-I21301).
consistent with previous breeding experience, in which the F 1 population
showed a tendency towards either one of the par-ents with cracking fruit in
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